Advanced scientific computing - guests

parallel I/O

  • z-order layout.
  • I/O access competing with bandwidth(bulk favored)
  • gather and access
  • IDX parallel conversion
  • region of interest based dumps
  • performance prediction

Molecular simulation “Falcon” supercomputer

  • MDS(molecular dynamics simulations) modeling
  • initial position & velocity
  • force of choice
  • Emsembles

Compression based interactive in-situ visualization for large-scale simulation

Chongke Bi

Simulation: * initial * simulation * evaluation * adjust parameter * do it again or finish

Reserch: restart at any time * compression * visualization * in-situ

Result: Heterogeneously integrated visualization environment (HIVE) * parallel rendering * hardware independent * OS independent

Data Sharing method * Data sharing(code change) * Memory Sharing * Hard disk sharing

Parallel POD Compression Method * compression ratio * Proper orthogonal decomposition * parallelism * data loss

Visualization for supercomputing at TACC and Argonne

compute -> fileserver(really slow) -> visualization -> display

  • in-core
  • out-of-core
  • data parallel
  • in-situ - coprocessing(io forwarding)
  • in-situ - true in-situ